Dr. Rakesh Singh

Dr. Rakesh Singh
Principal Scientist & Head

Division/RS/Unit

Division of Genomic Resources

Contact

Off.-011-25802884
Email-rakesh.singh2-icar@nic.in, singhnbpgr@yahoo.com
Google Scholar : https://scholar.google.co.in/citations?hl=en&user=brf167cAAAAJ

Qualification

Degree Discipline Year
M.Sc.Molecular Biology and Biotechnology1994
M. Tech.Biochemical Engineering1996
Ph.D.Molecular Biology and Biotechnology2007
Post DoctorateFunctional Genomics, Washington State University, USA2012

SPECIALIZATION
Agricultural Biotechnology

Salient Achievements

SNP (Single Nucleotide Polymorphism) marker-based core developed:

  • North-eastern India rice core collection.
  • East Coast region rice core collection.
  • Grain Amaranth core collection.

Genomic Resource Generation:

  • SSR markers developed for Giloe (Tinospora Cordifolia), Kalmegh (Andrgraphis paniculata), Kala jeera (Elwendia persica), Grain Amaranth (Amaranthus hypochondriacus), Guava (Psidium guajava) cv. Allahabad Safeda through microsatellite enrichment, transcriptome, and whole genome sequencing methods.
  • A 64K SNP chip was developed for Grain Amaranth (Amaranthus hypochondriacus).


Patents:

Commercialization of technology:

  • A 64K SNP chip developed for Grain Amaranth has been commercialized through Agrinnovate India, Department of Agricultural Research and Education, Ministry of Agriculture and Farmers Welfare. (HTTPS://WWW.AGRINNOVATEINDIA.COM/INSTITUTES-WISE)

Copyrights Awarded:

  1. Copyright Reg. No. SW-15429/2022: AMARANTH GENOMIC RESOURCE DATABASE. Authors: Rakesh Singh, Akshay Singh, Ajay Kumar Mahato, S Rajkumar, A K Singh, Rakesh Bhardwaj, S K Kaushik, Sandeep Kumar, and Veena Gupta
  2. Copyright Reg. No. SW-15428/2022: TINOTRANSCRIPTDB (TINOSPORA CORDIFOLIA TRANSCRIPTS & SSR DATABASE. Authors: Rakesh Singh, Akshay Singh, Ajay Kumar Mahato, Rajesh Kumar, Amit K. Singh, Sundeep Kumar, Soma S. Marla, Ashok Kumar, and Nagendra K. Singh
  3. Copyright Reg. No. SW-15900/2022: APTRANSDB: ANDROGRAPHIS TRANSCRIPTS & SSR DATABASE. Authors: Rakesh Singh, Akshay Singh, Ajay Kumar Mahato, Rajesh Kumar, Amit K. Singh, Sundeep Kumar, Soma S. Marla, Ashok Kumar, and Nagendra K. Singh
  4. Copyright Reg. No. SW-20166/2025: BPGDB (BUNIUM PERSICUM GENOMIC RESOURCE DATABASE) Authors: Sangita Basal, Rakesh Singh, Nancy Sharma, and Akshay Singh

Genomic Resource Databases Developed:

  1. Database on Giloe (Tinospora cordifolia) Transcripts & SSR (http://www.nbpgr.ernet.in:8080/Tinospora/)
  2. Database on Kalmegh (Andrographis paniculate) Transcripts & SSR (http://www.nbpgr.ernet.in:8080/Andrographis/)
  3. Rice Germplasm Identification System (http://webtom.cabgrid.res.in/ricegis/)
  4. Amaranth Genomic Resource Database (http://www.nbpgr.ernet.in:8080/AmaranthGRD/)
  5. National Rice Resource Database (http://www.nbpgr.ernet.in:8080/nrrd/)
  6. Polymorph Predict: A universal web tool for rapid polymorphic microsatellite marker discovery (http://webtom.cabgrid.res.in/polypred/team.php)
  7. Kala jeera (Bunium persicum) database (http://www.nbpgr.org.in/BpGDB/)
  8. Luffa acutangula Genomic Resource Database (http://www.nbpgr.ernet.in:8080/Lacutangula/)
  9. Browntop Millet Genomic Resource Database (http://www.nbpgr.ernet.in:8080/BTmillet/)
  10. Linseed Genomic Resource Database (http://www.nbpgr.ernet.in:8080/LinseedDatabase/homepage.aspx)
  11. Fusarium Head Blight Database (https://nbpgr.org.in/FHBDb/index.php)

Infrastructure/Facility creation:

Established the Molecular Biology Laboratory for Cereals and Medicinal Crops at NRC on DNA Fingerprinting and Division of Genomic Resources, NBPGR. Also established a new GM Detection Research Facility and Genome Editing Research facility at the Division of Genomic Resources, ICAR-NBPGR, New Delhi. Operationalized several externally funded projects to develop, maintain, and utilise these facilities.

Awards/Honours

  • 2024    Fellow of the National Academy of Agriculture Sciences (NAAS), New Delhi, India.
  • 2024    Fellowship of the Indian Academy of Horticultural Sciences (IAHS), New Delhi, India.
  • 2020   Dr. B R Barwale Award for Application/Excellence in PGR, Indian Society of Plant Genetic Resources, New Delhi, India.
  • 2017    R K Arora Best Research Paper Award, Indian Society of Plant Genetic Resources, New Delhi, India.
  • 2015    Fellow of Indian Society of Genetics and Plant Breeding, New Delhi, India.
  • 2012    Fellow of Indian Society of Plant Genetic Resources, New Delhi, India.
  • 2011    Best Research Paper Award by the Horticultural Society of India, IARI, New Delhi, India.
  • 2010-11 DBT CREST Fellowship for Agricultural and Plant Biotechnology, Department of Biotechnology, Government of India, India.
  • 2009    Young Scientist Award (Biotechnology) for significant contributions in the field of Plant Genetic Resources, Society for Plant Research, India.
  • 2008    Jawahar Lal Nehru Award for Post-Graduate Agricultural Research, for outstanding research in Crop Sciences and Crop Improvement. Indian Council of Agriculture Research, India.
  • 2007/08 Dr. R S Paroda Young Scientist Award for significant contributions to the field of Plant Genetic Resources. Indian Society of Plant Genetic Resources, New Delhi, India.

Recent Publications Research Papers

  1. Eerapagula, R., Singh, A., Maurya, A., Singh, R., Singh, N.K., Mahato, A.K.  (2025) Genome-wide analysis of NAC transcription factors in grain amaranth reveals structural diversity and regulatory features. Scientific Reports. 15, 39968. https://doi.org/10.1038/s41598-025-23630-7 (IF: 3.90)
  2. Sachdeva S, R Singh* , H Singh, R Bharadwaj, A Jain, VK Singh, UM Singh, A Kumar, GP Singh(2025) Genome-wide association studies for identification of QTLs and key candidate genes to improve grain quality in rice (Oryza sativa L.), Food Chemistry: Molecular Sciences. 11:100313.  https://doi.org/10.1016/j.fochms.2025.100313 (IF: 4.70)
  3. Singh R* , AK Mahato, S. Rajkumar, AK Singh, A Singh, A Maurya, R Gupta, R Bhardwaj, SK Kaushik, S Kumar, V Gupta, K Singh and GP Singh (2025) Development and Validation of a high-density ‘AmahySNP’ genotyping array in grain amaranth (Amaranthus hypochondriacus). BMC Plant Biology.  25:1281.  https://doi.org/10.1186/s12870-025-07367-z (IF: 4.80)
  4. Ruperao P, K Tiwari, V Rai, R Yadav, M Angamuthu, AK Singh,BP Galvadiya, A Shah, N Gadol, A Kumar, R Subramani, H Vishwakarma, P Kanakasabapathi, S Govindasamy, R Maurya, T Batra, A Jayaraman, S Ramachandran, A Rathore, K Singh, R Singh, S Kalia, UB Angadi, S Mayes, GP Singh and P  Rangan (2025) Development of a composite core collection from 5,856 Sesame accessions being conserved in the Indian National Genebank. BMC Genomic Data. 26:57. https://doi.org/10.1186/s12863-025-01347-w (IF: 2.50)
  5. Kumari M, SR Padhi, M Arya, R Yadav, M Latha, A Pandey, R Singh, C Bhardwaj, A Kumar, JC Rana, KC Bhatt, R Bhardwaj, A Riar (2025) Nutritional profiling of horse gram through NIRS-based multi-trait prediction modelling. Scientific Reports.  15: 16950. https://doi.org/10.1038/s41598-025-01668-x (IF: 3.90)
  6. Pramanik K, AK Goswami, C Kumar, R Singh, R Prabha, SK Jha, M Thakre, S Goswami, K Aditya, A Maurya, S Chanda, P Mishra, S Sarkar, and A Kashyap (2025) Development of genome-wide SSR markers through in silico mining of guava (Psidium guajava L.) genome for genetic diversity analysis and transferability studies across species and genera. Frontiers in Plant Science. 16. https://doi.org/10.3389/fpls.2025.1527866 (IF: 4.80)
  7. Yadav JK, S Sinha, H Shukla, A Singh, TK Sahu, SK Jha, J Kumari, M Verma, S Kumar, R Singh, GP Singh, and AK Singh (2025) Genetic dissection of leaf rust resistance in a diversity panel of tetraploid wheat (Triticum turgidum). BMC Plant Biology.  25, 406. https://doi.org/10.1186/s12870-025-06330-2 (IF: 4.80)
  8. Gaikwad AB, S Yadav, R Kumari, W Maurya, P Rangan, R Singh, and GP Singh (2025) Chromosome-scale genome assembly of Trigonella corniculate (L.)L. (Nagauri pan /Kasuri methi), an important spice. Scientific Data. 12:509. https://doi.org/10.1038/s41597-025-04858-4  (IF: 5.80)
  9. Singh A, N Sharma, S Bansal*, R Singh* and GP Singh (2025) BpGDB: A Genomic Resource Database of Bunium persicum for Genetics and Breeding. Journal of Applied Research on Medicinal and Aromatic Plants. 46: 100630. https://doi.org/10.1016/j.jarmap.2025.100630 (IF: 3.60)
  10. Singh A, A Maurya, R Gupta, P Joshi, S Rajkumar, AK Singh, R Bhardwaj, GP Singh, and R Singh*  (2025) Genome-wide identification and expression profiling of WRKY gene family in grain amaranth (Amaranthus hypochondriacus L.) under salinity and drought stresses. BMC Plant Biology.  25, 265. https://doi.org/10.1186/s12870-025-06270-x (IF: 4.80)
  11. Bashir L, N Budhlakoti, AK Pradhan, D Sharma, A Jain, SS Rehman, V Kondal, SR Jacob, R Bhardwaj, K Gaikwad, DC Mishra, A Pandey, S Kaur, PK Bhati, R Singh, GP Singh, S Kumar (2025) Identification of Quantitative Trait Nucleotides for Grain Quality in Bread Wheat Under Heat Stress. Scientific Reports.  15, 6641. https://doi.org/10.1038/s41598-025-91199-2 (IF: 3.90)
  12. Kumari M, SK Chourey, M Arya, PS Mehta, R Bhardwaj, R Singh, V Gupta, SL Jain and KC Bhatt (2025) Genetic Variability Studies on Horse Gram [Macrotyloma uniflorum (Lam.) Verdc.] Landraces Using Agro-morphological Traits. Indian Journal of Plant Genetic Resources. 38(1), 30-43. https://doi.org/10.61949/0976-1926.2025.v38i01.04  (IF: 0.00)
  13. Choudhury DR, L Sharma, Suma A, G P Singh, R Singh* (2025) Exploring the genetic diversity and population structure of Bacopa monnieri (L) using random amplified (RAPD and ISSR) and gene-targeted (SCoT and CBDP) markers. Genet Resour. Crop Evol. 72, 1043–1063. https://doi.org/10.1007/s10722-024-02026-y (IF: 1.60)
  14. Ramya KR, K. Tripathi, R Singh*, A Pandey, RK Pamarthi, NR Rajendran, PG Gore, RR Panda, S Barpete, S Gomashe, KC Bhatt (2025) Insights into morphological and molecular diversity in grasspea (Lathyrus sativus L.) germplasm. Genet Resour. Crop Evol. 72, 543–555. https://doi.org/10.1007/s10722-024-01992-7  (IF: 1.60)
  15. Yadav AK, CK Singh, DP Wankhede,  RK Kalia, S Pradhan, S Ujjainwal, TK Sahu, NS Nathawat, RK Kakani, R Rani, R Kumar, R Pathak, R Singh, GP Singh, AK Singh (2025) Combined Genome‑Wide Association Study and Expression Analysis Unravels Candidate Genes Associated with Seed Weight in Moth Bean [Vigna aconitifolia (Jacq.) Marechal].Journal of Plant Growth Regulation. 44, 1973–1986. https://doi.org/10.1007/s00344-024-11517-2. (IF: 3.90)
  16. Kumar V, R Singh, and GP Singh (2025) Geographical Indications: Agricultural Perspectives with Special Reference to Rice Genetic Resources in India. Journal of Cereal Research. 17 (2), 135-145. http://doi.org/10.25174/2582-2675/2025/169734  (IF: 0.00)
  17. Deepika DD, PG Gore, GJ Abhishek, K Tripathi, R Singh, R Bharadwaj, VC Chalam, and KC Bhatt (2025) Exploring the Potential and Versatility of Nutrient-rich Legume Adzuki Bean: A REVIEW. Plant Archives. 25(1), 365-376. https://doi.org/10.51470/PLANTARCHIVES.2025.v25.supplement-1.052 (IF: 0.00)
  18. Deepika DD, PG. Gore, K Tripathi, A Katral, DR Choudhury, GJ Abhishek, S Ragi, Danakumar T., V Muthusamy, DK Sharma, R Singh*, KC Bhatt*  (2024)Exploring Genetic Diversity of Potential legume, Vigna angularis (Willd.) Ohwi and Ohashi through Agro-Morphological Traits and SSR Markers Analysis. PLoS ONE. 9 (12). e0312845. https://doi.org/10.1371/journal.pone.0312845 (IF: 2.60)
  19. Dhakad A, VB Patel, SK Singh, MK Verma, GP Mishra, VB Mhetre, C Kumar, R Singh, S Rajkumar, K Gaikwad (2024) Pollen biology and metaxenic studies on early maturing grape (Vitis vinifera L.) genotypes. Indian Journal of Agricultural Sciences. 94 (10): 1094–1099. https://doi.org/10.56093/ijas.v94i10.141725 (IF: 0.37)
  20. Choudhury DR; A Maurya; NK Singh; GP Singh; R Singh* (2024) Discovering new QTNs and candidate genes associated with rice grain-related traits within a collection of northeast core set and rice landraces. Plants 2024, 13 (12), 1707. https://doi.org/10.3390/plants13121707 (IF: 4.10)
  21. Kumar R; C Kumar; DR Choudhury; A Ranjan; RK Raipuria; KKD Dubey; A Mishra; C Kumar; MM Manzoor; A Kumar; A Kumari; K Singh; GP Singh; R Singh* (2024) Isolation, Characterization, and Expression Analysis of NAC Transcription Factor from Andrographis paniculata (Burm. f.) Nees and Their Role in Andrographolide Production. Genes, 15(4):422.  https://doi.org/10.3390/genes15040422 (IF: 2.80)
  22. Singh A, A Maurya, S Rajkumar, A K Singh, R Bhardwaj, SK Kaushik, S Kumar, K Singh, G P Singh, and R Singh* (2024) Genome-wide comparative analysis of five Amaranthaceae species reveals a large amount of repeat content. Plants 13(6) 824  https://doi.org/10.3390/plants13060824 (IF: 4.10)
  23. Sachdeva S, R Singh*, A Maurya, VK Singh, UM Singh, A Kumar, G P Singh (2024) New insights into QTNs and potential candidate genes governing rice yield via a multi-model genome-wide association study. BMC Plant Biology 24.124 https://doi.org/10.1186/s12870-024-04810-5 (IF: 4.80)
  24. Kumar KBC, K Tripathi, R Singh, PG Gore, R Kumar, R Bhardwaj, K Gupta (2024) Screening diverse cowpea (Vigna unguiculata (L.) Walp.) germplasm for Callosobruchus chinensis (L.) resistance and SSR-based genetic diversity assessment. Genet Resour Crop Evol. 71:3453–3469. https://doi.org/10.1007/s10722-024-01863-1 (IF: 1.60)
  25. Sachdeva S, R Singh*, A Maurya, VK Singh, UM Singh, A Kumar, G P Singh (2024) Multi-model genome-wide association studies for appearance quality in rice. Frontiers in Plant Science. 14: 1304388 https://doi.org/10.3389/fpls.2023.1304388 (IF: 4.80)
  26. Kabade, P; S Dixit, UM Singh, S Alam, S Bhosale, S Kumar; SK Singh, J Badri, NR Gopala Varma, R Nadimpalli, S Chetia, R Singh, S Pradhan, S Banerjee, R Deshmukh, S Singh, S Kalia, TR Sharma, S Singh, H Bhardwaj, A Kohli, A Kumar, P Sinha, V Singh (2024) SpeedFlower: a comprehensive speed breeding protocol for indica and japonica rice. Plant Biotechnology Journal. 22:1051–1066. https://doi.org/10.1111/pbi.14245 (IF: 10.50)
  27. Ahmad D, D Vijay, Archana HR, M Prasad, Arun Kumar MB, F Hossain, R Singh, K Tripathi, Ramappa S, I Ahmad (2024) Uncovering the seed germination and initial vigour potential of quality protein maize inbreds. AMA, Agricultural Mechanization in Asia, Africa and Latin America; 55(3): 17445-17453.(IF: 0.00)
  28. Sharma L, S Roy, T Goswami, P Satya, S Yadav, Pra Dey, R Kumar, AK Verma, R Singh, and GP Singh (2024) Role of Growth Hormones in Regulating Abiotic Stress Tolerance in Plants. Plant Health Archives. 2(4): 145-159. https://doi.org/10.54083/PHA/2.4.2024/145-159 (IF: 0.00)
  29. Ahmad D, D Vijay, Archana HR, M Prasad, Arun Kumar MB, F Hossain, R Singh and I Ahmad (2023) Identification of quality protein maize inbred lines with high seed germination and initial Vigour.  The Pharma Innovation Journal; 12(6): 6278-6283. (IF: 0.00)
  30. Ramya K R, R. Gupta, M Mishra, A. Pandey, K Tripathi, K C Bhatt, R Singh*  (2023) A modified DNA isolation protocol for high-quality DNA and long-term storability in Grass pea (Lathyrus sativus L.). Indian Journal of Genetics and Plant Breeding 83(4):602-604. https://doi.org/10.31742/ISGPB.83.4.16 (IF: 0.80)
  31. Deepika DD, SR Padhi, PG Gore, K Tripathi, AK Katral, KR Chandora, GJ Abhishek, V Kondal, R Singh, R Bharadwaj, KC Bhatt, JC Rana and A Riar (2023) Nutritional Potential of Adzuki Bean Germplasm and Mining Nutri-Dense Accessions through Multivariate Analysis. Foods 12(22): 4159. https://doi.org/10.3390/foods12224159 (IF: 5.10)
  32. Kumari M, SR Padhi, SK Chourey, V Kondal, SS Thakare, A Negi, V Gupta, M Arya, JK Yasin, R Singh, C Bharadwaj; A Kumar; R Bharadwaj; KC Bhatt; JC Rana, T Joshi; A Riar (2023) Unveiling diversity for quality traits in Horsegram {Macrotyloma uniflorum (Lam.) Verdc.} landraces. Plants 12(22):3803.  https://doi.org/10.3390/plants12223803 (IF: 4.10)
  33. Mahendran A, MC Yadav, S Tiwari, RK Bairwa, SG Krishnan, MK Rana, R Singh and TK Mondal (2023) Population structure and genetic differentiation analyses reveal high level of diversity and allelic richness in crop wild relatives of AA genome species of rice (Oryza sativa L.) in India. Journal of Applied Genetics, 64(4):645-666.  https://doi.org/10.1007/s13353-023-00787-3 (IF: 1.90)
  34. Nishmitha K., R Singh, J Akthar, BM Baishal and D Kamil (2023) Expression profiling and characterization of key RGA involved in Lentil Fusarium wilt Race 5 resistance.  World Journal of Microbiology and Biotechnology. 39(11):306. https://doi.org/10.1007/s11274-023-03748-4 (IF: 4.20)
  35. John R, Bollinedi H, Jeyaseelan C, Padhi SR, Neha, Nath D, Singh R, Ahlawat SP, Bhardwaj R, Rana JC (2023) Mining nutri-dense accessions from rice landraces of Assam, India. Heliyon. 9(7): e17524. https://doi.org/10.1016/j.heliyon.2023.e17524 (IF: 3.60)
  36. Singh A, Mahato AK, Maurya A, Subramani R, Singh AK, Bhardwaj R, Kaushik SK, Kumar S, Gupta V, Singh K and Singh R* (2023) Amaranth Genomic Resource Database (AGRDB): an integrated database resource of Amaranth genes and genomics. Frontiers in Plant Science. 14:1203855. https://doi.org/10.3389/fpls.2023.1203855 (IF: 4.80)
  37. Kumari J, Lakhwani D, Jakhar P, Sharma S, Tiwari S, Mittal S, Avashthi H, Shekhawat N, Singh K, Mishra KK, Singh R, Yadav MC, Singh GP and Singh AK (2023) Association mapping reveals novel genes and genomic regions controlling grain size architecture in mini core accessions of Indian National Genebank wheat germplasm collection. Frontiers in Plant Science. 14:1148658  https://doi.org/10.3389/fpls.2023.1148658 (IF: 4.80)
  38. Srivastav M, N Radadiya, S Ramachandra, P Jayswal, N Singh, S Singh, AK Mahato, G Tandon, A Gupta, R Devi, SH Subrayagowda, G Kumar, P Prakash, S Singh, N Sharma, A. Nagaraja, A Kar, SG Rudra, S Sethi, S Jaiswal, MA Iquebal, R Singh, SK Singh and NK Singh (2023)   High resolution mapping of QTLs for fruit color and firmness in Amrapali/Sensation mango hybrids. Frontiers in Plant Science. 14:1135285. https://doi.org/10.3389/fpls.2023.1135285 (IF: 4.80)
  39. Ruperao P, P Bajaj, S Rajkumar, R Yadav, VBR Lachagari, SP Lekkala, A Rathore, S Archak, UB Angadi, R Singh, K Singh, S Mayes, P Rangan (2023) A pilot-scale comparison between single and double-digest RAD markers generated using GBS strategy in sesame (Sesamum indicum L.). PLoS ONE. 18(6): e0286599. https://doi.org/10.1371/journal.pone.0286599 (IF: 2.60)
  40. Singh R*, A Singh, AK Mahato, R Paliwal, G Tiwari, and A Kumar (2023) De Novo   Transcriptome Profiling for the Generation and Validation of Microsatellite Markers, Transcription Factors, and Database Development for Andrographis paniculata. International Journal of Molecular Sciences. Int. J. Mol. Sci. 24, 9212. https://doi.org/10.3390/ijms24119212 (IF: 4.90)
  41. Choudhury DR, R Kumar, A Maurya, DP Semwal, RS Rathi, RK Gautam, AK Trivedi, SK Bishnoi, SP Ahlawat, Kuldeep Singh, NK Singh, and R Singh* (2023) SSR and SNP marker-based investigation of Indian rice land-races in relation to their genetic diversity, population structure, and geographical isolation. Agriculture. 13(4), 823. https://doi.org/10.3390/agriculture13040823 (IF: 3.60)
  42. Nishmitha K, R Singh*, SC Dubey, J Akhtar, K Tripathi, and D Kamil* (2023) Resistance screening and in-silico characterization of cloned novel RGA from multi-race resistant Lentil germplasm against Fusarium wilt (Fusarium oxysporum f. sp. Len lentils. Frontiers in Plant Science. 14. 1147220. https://doi.org/10.3389/fpls.2023.1147220 (IF: 4.80)
  43. Shruti, A Shukla, SS Rahman, P Suneja, R Yadav, Z Hussain, R Singh, SK Yadav, JC Rana, S Yadav, and R Bhardwaj (2023) Developing an NIRS Prediction Model for Oil, Protein, Amino Acids and Fatty Acids in Amaranth and Buckwheat. Agriculture 13(2), 469. https://doi.org/10.3390/agriculture13020469 (IF: 3.60)
  44. Vats G, D Das, R Gupta, A Singh, A Maurya, S. Rajkumar, AK Singh, R Bhardwaj, S Kumar, SK Kaushik, V Gupta, K Singh and R Singh* (2023) Validation of Genome-wide SSR markers developed for genetic diversity and population structure study in Grain Amaranth (Amaranthus hypochondriacus). Agriculture 13(2),431. https://doi.org/10.3390/agriculture13020431 (IF: 3.60)
  45. Chandra T, S Jaiswal, MA Iquebal, R Singh, RK Gautam, A Rai, D Kumar (2023) Revitalizing miRNAs mediated agronomical advantageous traits improvement in rice, Plant Physiology and Biochemistry, 202:107933.  https://doi.org/10.1016/j.plaphy.2023.107933 (IF: 5.70)
  46. Kumar S, AK Pradhan, U Kumar, GS Dhillon, S Kaur, N Budhlakoti, DC Mishra, AK Singh, R Singh, J Kumari, VV Kumaran, VK Mishra, PK Bhati, S Das, R Chand, K Singh and S Kumar (2022) Validation of Novel spot blotch disease resistance alleles identified in unexplored wheat (Triticum aestivum L.) germplasm lines through KASP markers. BMC Plant Biology. 22.618. https://doi.org/10.1186/s12870-022-04013-w (IF: 4.80)
  47. Paliwal R, R Singh*, DR Choudhury, G Tiwari, A Kumar, KC Bhatt and Rita Singh (2022) Molecular Characterization of Tinospora cordifolia (Willd.) Miers Using Novel g-SSR Markers and Their Comparison with EST-SSR and SCoT Markers for Genetic Diversity Study. Genes. 13(11):2042. https://doi.org/10.3390/genes13112042 (IF: 2.80)
  48. Gangappa ND, C Singh, MK Verma, M Thakre, AMV Sevanthi, R Singh, M Srivastav, Raghunandan K, C Anusha, V Yadav, A Nagaraja (2022) Assessing the genetic diversity of guava germplasm characterized by morpho-biochemical traits. Frontiers in Nutrition. 9:1017680. https://doi.org/10.3389/fnut.2022.1017680 (IF: 5.10)
  49. Singh R*, AK Mahato, A Singh, R Kumar, A K Singh, S Kumar, SS Marla, A Kumar, NK Singh (2022) TinoTranscriptDB: Transcripts and Microsatellite Markers Database of Tinospora cordifolia, an Important Medicinal Plant. Genes. 13(8):1433.  https://doi.org/10.3390/genes13081433 (IF: 2.80)
  50. John, Racheal, R. Bhardwaj, C. Jeyaseelan, H. Bollinedi, N. Singh, Harish G.D., R Singh, D. Nath, M. Arya, D. Sharma, S. Singh, J. John K, M. Latha, J.C. Rana, S.P. Ahlawat, A. Kumar (2022) Germplasm Variability Assisted NIRS Chemometrics to Develop Multi-Trait Robust Prediction Models in Rice. Frontiers in Nutrition. 2022:946255. https://doi.org/10.3389/fnut.2022.946255  (IF: 5.10)
  51. Panigrahi, S.K., K. Tripathi, R. Singh, R. Kumar, P. Sanghamitra, D.P. Wankhede, N. Singh, K. K. Dubey and K. Gupta (2022). Evaluation of black gram (Vigna mungo) gene pool against Callosobruchus maculatus and diversity analysis inter se. The Indian Journal of Agricultural Sciences. 92(7):915–919. https://doi.org/10.56093/ijas.v92i7.122390 (IF: 0.37)
  52. Mhetre, Vishal B., V.B. Patel, S.K. Singh, Gyan P. Mishra, M.K. Verma, Chavlesh Kumar, Anil Dahuja, Sanjeev Kumar, R Singh, and M. Wasim Siddiqui (2022) Unraveling the pathways influencing the berry color and firmness of grapevine cv. Flame Seedless treated with bioregulators using biochemical and RNA-Seq analysis under semi-arid subtropics. Food Chemistry: Molecular Sciences. 5:100116. https://doi.org/10.1016/j.fochms.2022.100116 (IF: 4.70)
  53. Pandey A, V Devi, S Nivedhitha, RK Pamarthi, R Gupta, R Singh, SP Ahlawat and K Singh (2022) Towards Strengthening the National Herbarium of Cultivated Plants with Rice Landrace Diversity. Indian J. Plant Genet. Resour. 35(1): 11-20. https://doi.org/10.5958/0976-1926.2022.00003.1 (IF: 0.00)
  54. Kumar R, C Kumar, R Jain, A Maurya, A Kumar, A Kumari, R Singh* (2022) Molecular cloning and in-silico characterization of NAC86 of Kalmegh (Andrographis paniculata). Indian Journal of Horticulture 79(1):9-14. https://doi.org/10.5958/0974-0112.2022.00002.0 (IF: 0.00)
  55. Bansal S, A Kumar; AA Lone; MH Khan; EV Malhotra; R Singh (2022) Development of novel Genome-wide simple sequence repeats (SSR) markers in Bunium persicum. Industrial Crops and Products. 178. 114625. https://doi.org/10.1016/j.indcrop.2022.1146 (IF: 6.20)
  56. Gore PG, V Gupta, R Singh, K Tripathi, R Kumar, G Kumari, Latha M, HK Dikshit, Kamala V, A Pandey, N Singh, KV Bhat, RM Nair an,d A Pratap (2022) Understanding the genetic diversity of an underutilized Indian legume, Vigna stipulacea (Lam.) Kuntz., using morphological traits and microsatellite markers and identification of trait-specific germplasm. PLoS ONE 17(1): e0262634. https://doi.org/10.1371/journal.pone.0262634 (IF: 2.60)
  57. Prasad G, S Mittal, A Kumar, D Chauhan, TK Sahu, S Kumar, R Singh, M Yadav and AK Singh (2022) Transcriptome analysis of bread wheat genotype KRL3-4 provides a new insight into regulatory mechanisms associated with sodicity (high pH) tolerance. Frontiers in Genetics. 12. 782366. https://doi.org/10.3389/fgene.2021.782366 (IF: 2.80)
  58. Shivran M, N Sharma, AK Dubey, SK Singh, N Sharma, RM Sharma, N Singh and R Singh (2022) S.cion–Rootstock Relationship: Molecular Mechanism and Quality Fruit Production. Agriculture. 12(12), 2036. https://doi.org/10.3390/agriculture12122036 (IF: 3.60)
  59. Gautam, RK, Langyan S, S. Vimla Devi, Singh R, Semwal D P, Ali S, Mangat G S, Sarkar S, Bagchi TB, Roy S, Senguttuvel P, Bhuvaneswari S, Chetia S, Tripathi K, Harish GD, Kumar A, Singh K (2022) Genetic resources of sticky rice in India: status and prospects. Genetic Resources and Crop Evolution. https://doi.org/10.1007/s10722-022-01479-3  (IF: 1.60)
  60. Singh* R and R Kumar (2022) Genomic Resource Generation in Medicinal and Aromatic Plants. Indian J. Plant Genet. Resources 35(3): 204–212. (IF: 0.00)
  61. Wankhede DP, Singh R and S Rajkumar (2022) Genomic Tools in Plant Genetic Resource Management. Indian J. Plant Genet. Resources 35(3): 194–199. https://doi.org/10.5958/0976-1926.2022.00068.7 (IF: 0.00)
  62. Roy Choudhury D, R Kumar, V Devi S, K Singh, N K Singh, R Singh* (2021) Identification of a diverse core set panel of rice from the east coast region of India using SNP markers. Frontiers in Genetics.12:726152. https://doi.org/10.3389/fgene.2021.726152 (IF: 2.80)
  63. Nikhil HN, AK Goswami, SK Singh, C Kumar, S Goswami, R Singh, C Bharadwaj and NK Maurya (2021) Assessment of morpho-genetic diversity of guava (Psidium guajava) hybrids and genotypes. Indian Journal of Agricultural Sciences. 91(11):1640-45 (IF: 0.37)
  64. Dev R, SK Singh, R Singh, AK Singh, VB Patel, M Alizadeh, K Motha and K Kumar (2021) Assessment of genetic diversity in gamma rays irradiated mutants of four grape genotypes based on RAPD and SSR markers. Indian Journal of Horticulture 78(1): 17-24. https://doi.org/10.5958/0974-0112.2021.00003.7  (IF: 0.00)
  65. Sarawgi AK, AK Pachauri, S Vimala Devi and R Singh (2021) Identification of Unique Type of Decorticated Grain Colour in Rice Designated as “Potato Green Colour”. Indian J. Plant Genet. Resour. 34(1): 79–81. https://doi.org/10.5958/0976-1926.2021.00012.7  (IF: 0.00)
  66. Sridhar R, M Srivastav, SK Singh, AK Mahto, N Singh, A Nagaraja, R Singh and NK Singh (2021) New genomic markers for marker assisted breeding in mango (Mangifera indica L.). The Journal of Horticultural Science & Biotechnology. 96(5): 614-623. https://doi.org/10.1080/14620316.2021.1906760   (IF: 2.10)
  67. Srivastav M, SK Singh, J Prakash, R Singh, N Sharma, S Ramchandra, R Devi, A Gupta, AK Mahto, PK. Jayaswal, S Singh and NK Singh (2021) New hyper-variable SSRs for diversity analysis in mango (Mangifera indica L.). Indian J. Genet., 81(1):119-126. https://doi.org/10.31742/IJGPB.81.1.13 (IF: 0.80)
  68. Kumar R, Das S, Mishra M, Roy Choudhury D, Sharma K, Kumari A, Singh* R (2021) Emerging roles of NAC transcription factor in medicinal plants: progress and prospects. 3 Biotech 11(10):425. https://doi.org/10.1007/s13205-021-02970-x (IF: 2.90)
  69. Bansal S, Sharma K, Gautam V, Lone AA, Malhotra EV, Kumar S, Singh R (2021) A Comprehensive Review of Bunium persicum: A Valuable Medicinal Spice. Food Reviews International. https://doi.org/10.1080/87559129.2021.1929305 (IF: 6.00)
  70. Kumar R, C Kuma, R Paliwal, DR Choudhury, I Singh, A Kumar, A Kumari and R Singh* (2020) Development of Novel Genomic Simple Sequence Repeat (g-SSR) Markers and Their Validation for Genetic Diversity Analyses in Kalmegh [ Andrographis Paniculata (Burm. F.) Nees]. Plants 9(12):1734.  https://doi.org/10.3390/plants9121734 (IF: 4.10)
  71. Kumar C, R Kumar, SK Singh, AK Goswami, A. Nagaraja, R Paliwal, R Singh* (2020). Development of novel g-SSR markers in guava (Psidium guajava L.) cv. Allahabad Safeda and their application in genetic diversity, population structure and cross species transferability studies. PLoS ONE 15(8): e0237538. https://doi.org/10.1371/journal.pone.0237538 (IF: 2.60)
  72. Singh A, Y Singh, A Mahato, P Jayaswal, S Singh, R Singh, N Yadav, A Singh, P Singh, R Singh, R Kumar, E Septiningsih, H Balyan, N K Singh (2020). Allelic sequence variation in the Sub1A, Sub1B and Sub1C genes among diverse rice cultivars and its association with submergence tolerance. Scientific Reports 10:8621. https://doi.org/10.1038/s41598-020-65588-8 (IF: 3.90)
  73. Singh AK, N Singh, S Kumar, J Kumari, R Singh, S Gaba, MC Yadav, M Grover, S Chaurasia, R Kumar (2020) Identification and evolutionary analysis of polycistronic miRNA clusters in domesticated and wild wheat. Genomics 112: 2334-2348. https://doi.org/10.1016/j.ygeno.2020.01.005 (IF: 3.00)

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